Protein–RNA interactions for Protein: O09061

Psmb1, Proteasome subunit beta type-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb1O09061 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmb1O09061 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmb1O09061 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Psmb1O09061 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.18■□□□□ 0.82
Psmb1O09061 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmb1O09061 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.18■□□□□ 0.82
Psmb1O09061 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmb1O09061 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmb1O09061 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmb1O09061 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Psmb1O09061 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.17■□□□□ 0.82
Psmb1O09061 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.17■□□□□ 0.82
Psmb1O09061 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmb1O09061 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmb1O09061 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.16■□□□□ 0.82
Psmb1O09061 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmb1O09061 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmb1O09061 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmb1O09061 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmb1O09061 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Psmb1O09061 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmb1O09061 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Psmb1O09061 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmb1O09061 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmb1O09061 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Psmb1O09061 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Psmb1O09061 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Psmb1O09061 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Psmb1O09061 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Psmb1O09061 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Psmb1O09061 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Psmb1O09061 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.14■□□□□ 0.81
Psmb1O09061 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Psmb1O09061 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Psmb1O09061 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Psmb1O09061 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Psmb1O09061 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Psmb1O09061 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Psmb1O09061 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Psmb1O09061 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Psmb1O09061 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Psmb1O09061 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Psmb1O09061 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.11■□□□□ 0.81
Psmb1O09061 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Psmb1O09061 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Psmb1O09061 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Psmb1O09061 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.1■□□□□ 0.81
Psmb1O09061 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Psmb1O09061 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Psmb1O09061 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Psmb1O09061 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Psmb1O09061 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Psmb1O09061 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Psmb1O09061 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.09■□□□□ 0.81
Psmb1O09061 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Psmb1O09061 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Psmb1O09061 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Psmb1O09061 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.08■□□□□ 0.81
Psmb1O09061 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Psmb1O09061 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Psmb1O09061 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Psmb1O09061 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Psmb1O09061 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.08■□□□□ 0.8
Psmb1O09061 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Psmb1O09061 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Psmb1O09061 Gm5921-201ENSMUST00000075898 882 ntBASIC20.07■□□□□ 0.8
Psmb1O09061 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Psmb1O09061 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Psmb1O09061 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Psmb1O09061 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Psmb1O09061 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Psmb1O09061 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Psmb1O09061 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Psmb1O09061 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Psmb1O09061 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Psmb1O09061 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Psmb1O09061 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Psmb1O09061 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Psmb1O09061 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Psmb1O09061 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Psmb1O09061 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Psmb1O09061 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.03■□□□□ 0.8
Psmb1O09061 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Psmb1O09061 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Psmb1O09061 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Psmb1O09061 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Psmb1O09061 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Psmb1O09061 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.03■□□□□ 0.8
Psmb1O09061 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Psmb1O09061 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.02■□□□□ 0.8
Psmb1O09061 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Psmb1O09061 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms