Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2b3O09039 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.77■□□□□ 0.76
Sh2b3O09039 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2b3O09039 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh2b3O09039 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.76■□□□□ 0.75
Sh2b3O09039 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh2b3O09039 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sh2b3O09039 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2b3O09039 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sh2b3O09039 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.75■□□□□ 0.75
Sh2b3O09039 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sh2b3O09039 Terc-201ENSMUST00000082862 423 ntBASIC19.75■□□□□ 0.75
Sh2b3O09039 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.75■□□□□ 0.75
Sh2b3O09039 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh2b3O09039 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2b3O09039 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2b3O09039 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2b3O09039 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2b3O09039 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.74■□□□□ 0.75
Sh2b3O09039 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh2b3O09039 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.73■□□□□ 0.75
Sh2b3O09039 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sh2b3O09039 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh2b3O09039 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Sh2b3O09039 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh2b3O09039 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2b3O09039 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.71■□□□□ 0.75
Sh2b3O09039 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2b3O09039 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sh2b3O09039 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2b3O09039 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2b3O09039 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.71■□□□□ 0.75
Sh2b3O09039 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2b3O09039 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sh2b3O09039 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2b3O09039 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2b3O09039 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2b3O09039 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sh2b3O09039 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2b3O09039 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.7■□□□□ 0.74
Sh2b3O09039 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.7■□□□□ 0.74
Sh2b3O09039 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.7■□□□□ 0.74
Sh2b3O09039 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2b3O09039 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2b3O09039 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2b3O09039 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2b3O09039 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sh2b3O09039 Gm10420-201ENSMUST00000121713 882 ntBASIC19.69■□□□□ 0.74
Sh2b3O09039 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.69■□□□□ 0.74
Sh2b3O09039 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2b3O09039 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2b3O09039 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2b3O09039 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sh2b3O09039 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2b3O09039 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2b3O09039 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.68■□□□□ 0.74
Sh2b3O09039 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2b3O09039 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2b3O09039 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2b3O09039 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2b3O09039 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2b3O09039 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Sh2b3O09039 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2b3O09039 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2b3O09039 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Sh2b3O09039 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2b3O09039 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2b3O09039 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sh2b3O09039 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2b3O09039 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2b3O09039 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2b3O09039 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2b3O09039 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2b3O09039 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2b3O09039 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2b3O09039 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2b3O09039 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh2b3O09039 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2b3O09039 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2b3O09039 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2b3O09039 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sh2b3O09039 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sh2b3O09039 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sh2b3O09039 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2b3O09039 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.62■□□□□ 0.73
Sh2b3O09039 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2b3O09039 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2b3O09039 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sh2b3O09039 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2b3O09039 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.61■□□□□ 0.73
Sh2b3O09039 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh2b3O09039 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms