Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ebf3O08791 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ebf3O08791 Gm15546-201ENSMUST00000122095 826 ntBASIC23.12■■□□□ 1.29
Ebf3O08791 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ebf3O08791 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.11■■□□□ 1.29
Ebf3O08791 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ebf3O08791 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ebf3O08791 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ebf3O08791 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ebf3O08791 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ebf3O08791 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.1■■□□□ 1.29
Ebf3O08791 Gm22567-201ENSMUST00000175542 342 ntBASIC23.1■■□□□ 1.29
Ebf3O08791 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ebf3O08791 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.09■■□□□ 1.29
Ebf3O08791 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.09■■□□□ 1.29
Ebf3O08791 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.09■■□□□ 1.29
Ebf3O08791 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ebf3O08791 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Ebf3O08791 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Ebf3O08791 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.09■■□□□ 1.29
Ebf3O08791 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.09■■□□□ 1.29
Ebf3O08791 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ebf3O08791 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ebf3O08791 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ebf3O08791 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ebf3O08791 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ebf3O08791 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ebf3O08791 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ebf3O08791 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ebf3O08791 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ebf3O08791 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.05■■□□□ 1.28
Ebf3O08791 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ebf3O08791 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ebf3O08791 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ebf3O08791 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ebf3O08791 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ebf3O08791 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ebf3O08791 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.04■■□□□ 1.28
Ebf3O08791 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ebf3O08791 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ebf3O08791 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ebf3O08791 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ebf3O08791 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ebf3O08791 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ebf3O08791 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.02■■□□□ 1.28
Ebf3O08791 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ebf3O08791 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ebf3O08791 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ebf3O08791 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ebf3O08791 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Ebf3O08791 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.99■■□□□ 1.27
Ebf3O08791 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ebf3O08791 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ebf3O08791 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.99■■□□□ 1.27
Ebf3O08791 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.99■■□□□ 1.27
Ebf3O08791 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ebf3O08791 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.99■■□□□ 1.27
Ebf3O08791 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ebf3O08791 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ebf3O08791 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ebf3O08791 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Ebf3O08791 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ebf3O08791 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ebf3O08791 Gm13238-201ENSMUST00000117655 780 ntBASIC22.98■■□□□ 1.27
Ebf3O08791 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.98■■□□□ 1.27
Ebf3O08791 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ebf3O08791 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ebf3O08791 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ebf3O08791 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ebf3O08791 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ebf3O08791 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Ebf3O08791 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.96■■□□□ 1.27
Ebf3O08791 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.96■■□□□ 1.27
Ebf3O08791 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ebf3O08791 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.96■■□□□ 1.27
Ebf3O08791 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ebf3O08791 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ebf3O08791 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ebf3O08791 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Ebf3O08791 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ebf3O08791 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ebf3O08791 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.95■■□□□ 1.26
Ebf3O08791 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ebf3O08791 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ebf3O08791 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ebf3O08791 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ebf3O08791 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ebf3O08791 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ebf3O08791 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ebf3O08791 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ebf3O08791 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ebf3O08791 Gm15820-201ENSMUST00000201566 728 ntBASIC22.93■■□□□ 1.26
Ebf3O08791 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.93■■□□□ 1.26
Ebf3O08791 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ebf3O08791 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ebf3O08791 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ebf3O08791 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ebf3O08791 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
Ebf3O08791 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ebf3O08791 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms