Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv1-88A0A140T8N1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Igkv1-88A0A140T8N1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv1-88A0A140T8N1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv1-88A0A140T8N1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Igkv1-88A0A140T8N1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Igkv1-88A0A140T8N1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv1-88A0A140T8N1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Igkv1-88A0A140T8N1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv1-88A0A140T8N1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv1-88A0A140T8N1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv1-88A0A140T8N1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv1-88A0A140T8N1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv1-88A0A140T8N1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv1-88A0A140T8N1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv1-88A0A140T8N1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igkv1-88A0A140T8N1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Igkv1-88A0A140T8N1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igkv1-88A0A140T8N1 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.58□□□□□ -0.08
Igkv1-88A0A140T8N1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Igkv1-88A0A140T8N1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv1-88A0A140T8N1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv1-88A0A140T8N1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.58□□□□□ -0.08
Igkv1-88A0A140T8N1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv1-88A0A140T8N1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Igkv1-88A0A140T8N1 Nkain2-201ENSMUST00000092602 558 ntBASIC14.55□□□□□ -0.08
Igkv1-88A0A140T8N1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv1-88A0A140T8N1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Igkv1-88A0A140T8N1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv1-88A0A140T8N1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv1-88A0A140T8N1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv1-88A0A140T8N1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms