Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm22567-201ENSMUST00000175542 342 ntBASIC26.61■■□□□ 1.85
Cfap99A0A140LIX9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.61■■□□□ 1.85
Cfap99A0A140LIX9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cfap99A0A140LIX9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cfap99A0A140LIX9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cfap99A0A140LIX9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Cfap99A0A140LIX9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cfap99A0A140LIX9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cfap99A0A140LIX9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cfap99A0A140LIX9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cfap99A0A140LIX9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Cfap99A0A140LIX9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cfap99A0A140LIX9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.58■■□□□ 1.85
Cfap99A0A140LIX9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cfap99A0A140LIX9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cfap99A0A140LIX9 Gm15546-201ENSMUST00000122095 826 ntBASIC26.58■■□□□ 1.85
Cfap99A0A140LIX9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cfap99A0A140LIX9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.57■■□□□ 1.84
Cfap99A0A140LIX9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cfap99A0A140LIX9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cfap99A0A140LIX9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cfap99A0A140LIX9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cfap99A0A140LIX9 Gm44428-201ENSMUST00000204474 874 ntBASIC26.57■■□□□ 1.84
Cfap99A0A140LIX9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cfap99A0A140LIX9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.56■■□□□ 1.84
Cfap99A0A140LIX9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Cfap99A0A140LIX9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cfap99A0A140LIX9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cfap99A0A140LIX9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cfap99A0A140LIX9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Cfap99A0A140LIX9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cfap99A0A140LIX9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.55■■□□□ 1.84
Cfap99A0A140LIX9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cfap99A0A140LIX9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cfap99A0A140LIX9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cfap99A0A140LIX9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cfap99A0A140LIX9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cfap99A0A140LIX9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cfap99A0A140LIX9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.53■■□□□ 1.84
Cfap99A0A140LIX9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cfap99A0A140LIX9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cfap99A0A140LIX9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Cfap99A0A140LIX9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC26.51■■□□□ 1.83
Cfap99A0A140LIX9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cfap99A0A140LIX9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.51■■□□□ 1.83
Cfap99A0A140LIX9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Cfap99A0A140LIX9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Cfap99A0A140LIX9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cfap99A0A140LIX9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Cfap99A0A140LIX9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.5■■□□□ 1.83
Cfap99A0A140LIX9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cfap99A0A140LIX9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cfap99A0A140LIX9 Gm15039-201ENSMUST00000118914 875 ntBASIC26.48■■□□□ 1.83
Cfap99A0A140LIX9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Cfap99A0A140LIX9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cfap99A0A140LIX9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cfap99A0A140LIX9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cfap99A0A140LIX9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cfap99A0A140LIX9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cfap99A0A140LIX9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cfap99A0A140LIX9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cfap99A0A140LIX9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cfap99A0A140LIX9 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.46■■□□□ 1.83
Cfap99A0A140LIX9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cfap99A0A140LIX9 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.45■■□□□ 1.82
Cfap99A0A140LIX9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cfap99A0A140LIX9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cfap99A0A140LIX9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cfap99A0A140LIX9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cfap99A0A140LIX9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cfap99A0A140LIX9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cfap99A0A140LIX9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cfap99A0A140LIX9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.43■■□□□ 1.82
Cfap99A0A140LIX9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.43■■□□□ 1.82
Cfap99A0A140LIX9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cfap99A0A140LIX9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Cfap99A0A140LIX9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cfap99A0A140LIX9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cfap99A0A140LIX9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cfap99A0A140LIX9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cfap99A0A140LIX9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cfap99A0A140LIX9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cfap99A0A140LIX9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cfap99A0A140LIX9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Cfap99A0A140LIX9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cfap99A0A140LIX9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cfap99A0A140LIX9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cfap99A0A140LIX9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cfap99A0A140LIX9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cfap99A0A140LIX9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Cfap99A0A140LIX9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cfap99A0A140LIX9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cfap99A0A140LIX9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms