Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav6-7-dv9A0A075B639 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav6-7-dv9A0A075B639 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.74■□□□□ 0.75
Trav6-7-dv9A0A075B639 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav6-7-dv9A0A075B639 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav6-7-dv9A0A075B639 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav6-7-dv9A0A075B639 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-7-dv9A0A075B639 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-7-dv9A0A075B639 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-7-dv9A0A075B639 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-7-dv9A0A075B639 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-7-dv9A0A075B639 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6-7-dv9A0A075B639 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-7-dv9A0A075B639 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-7-dv9A0A075B639 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.71■□□□□ 0.75
Trav6-7-dv9A0A075B639 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trav6-7-dv9A0A075B639 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-7-dv9A0A075B639 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-7-dv9A0A075B639 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-7-dv9A0A075B639 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-7-dv9A0A075B639 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-7-dv9A0A075B639 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-7-dv9A0A075B639 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-7-dv9A0A075B639 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Trav6-7-dv9A0A075B639 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6-7-dv9A0A075B639 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6-7-dv9A0A075B639 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trav6-7-dv9A0A075B639 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.69■□□□□ 0.74
Trav6-7-dv9A0A075B639 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trav6-7-dv9A0A075B639 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-7-dv9A0A075B639 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-7-dv9A0A075B639 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trav6-7-dv9A0A075B639 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trav6-7-dv9A0A075B639 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-7-dv9A0A075B639 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trav6-7-dv9A0A075B639 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-7-dv9A0A075B639 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-7-dv9A0A075B639 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Trav6-7-dv9A0A075B639 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Trav6-7-dv9A0A075B639 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-7-dv9A0A075B639 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-7-dv9A0A075B639 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trav6-7-dv9A0A075B639 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-7-dv9A0A075B639 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-7-dv9A0A075B639 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trav6-7-dv9A0A075B639 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-7-dv9A0A075B639 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.66■□□□□ 0.74
Trav6-7-dv9A0A075B639 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-7-dv9A0A075B639 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-7-dv9A0A075B639 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.65■□□□□ 0.74
Trav6-7-dv9A0A075B639 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-7-dv9A0A075B639 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-7-dv9A0A075B639 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-7-dv9A0A075B639 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trav6-7-dv9A0A075B639 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trav6-7-dv9A0A075B639 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-7-dv9A0A075B639 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.64■□□□□ 0.73
Trav6-7-dv9A0A075B639 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.64■□□□□ 0.73
Trav6-7-dv9A0A075B639 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav6-7-dv9A0A075B639 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-7-dv9A0A075B639 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.64■□□□□ 0.73
Trav6-7-dv9A0A075B639 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6-7-dv9A0A075B639 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6-7-dv9A0A075B639 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trav6-7-dv9A0A075B639 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.61■□□□□ 0.73
Trav6-7-dv9A0A075B639 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-7-dv9A0A075B639 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.61■□□□□ 0.73
Trav6-7-dv9A0A075B639 Gm6311-201ENSMUST00000073790 878 ntBASIC19.61■□□□□ 0.73
Trav6-7-dv9A0A075B639 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-7-dv9A0A075B639 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trav6-7-dv9A0A075B639 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-7-dv9A0A075B639 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-7-dv9A0A075B639 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-7-dv9A0A075B639 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-7-dv9A0A075B639 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-7-dv9A0A075B639 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.59■□□□□ 0.73
Trav6-7-dv9A0A075B639 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms