Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LIN7CQ9NUP9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
LIN7CQ9NUP9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.03
LIN7CQ9NUP9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LIN7CQ9NUP9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.83□□□□□ -0.03
LIN7CQ9NUP9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.83□□□□□ -0.03
LIN7CQ9NUP9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LIN7CQ9NUP9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 AC009947.2-201ENST00000444014 672 ntBASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIN7CQ9NUP9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIN7CQ9NUP9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 AC141586.5-201ENST00000624546 2050 ntBASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 LINC01126-201ENST00000623515 1646 ntBASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 AC108860.2-201ENST00000562760 2183 ntBASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 RCN1P1-201ENST00000400413 996 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms