Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CD99-202ENST00000381180 530 ntTSL 2 BASIC25.39■■□□□ 1.65
SCAF11Q99590 AL020989.1-201ENST00000422979 469 ntBASIC25.39■■□□□ 1.65
SCAF11Q99590 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF11Q99590 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC25.39■■□□□ 1.65
SCAF11Q99590 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
SCAF11Q99590 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC25.39■■□□□ 1.65
SCAF11Q99590 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25.39■■□□□ 1.65
SCAF11Q99590 AC091812.2-201ENST00000619081 385 ntBASIC25.39■■□□□ 1.65
SCAF11Q99590 AC004877.2-201ENST00000623941 599 ntBASIC25.39■■□□□ 1.65
SCAF11Q99590 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC25.39■■□□□ 1.65
SCAF11Q99590 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF11Q99590 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF11Q99590 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
SCAF11Q99590 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCAF11Q99590 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
SCAF11Q99590 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 AC098818.2-201ENST00000564925 2320 ntBASIC25.38■■□□□ 1.65
SCAF11Q99590 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF11Q99590 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 AL353593.2-201ENST00000602529 1483 ntBASIC25.38■■□□□ 1.65
SCAF11Q99590 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF11Q99590 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCAF11Q99590 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC25.38■■□□□ 1.65
SCAF11Q99590 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
SCAF11Q99590 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SCAF11Q99590 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC25.38■■□□□ 1.65
SCAF11Q99590 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF11Q99590 WIZP1-201ENST00000531444 2299 ntBASIC25.37■■□□□ 1.65
SCAF11Q99590 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF11Q99590 KLK8-202ENST00000320838 456 ntTSL 5 BASIC25.37■■□□□ 1.65
SCAF11Q99590 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SCAF11Q99590 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF11Q99590 PAWRP1-201ENST00000451083 565 ntBASIC25.37■■□□□ 1.65
SCAF11Q99590 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC25.37■■□□□ 1.65
SCAF11Q99590 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC25.37■■□□□ 1.65
SCAF11Q99590 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SCAF11Q99590 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SCAF11Q99590 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC25.37■■□□□ 1.65
SCAF11Q99590 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCAF11Q99590 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SCAF11Q99590 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
SCAF11Q99590 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC25.36■■□□□ 1.65
SCAF11Q99590 MRPL20P1-201ENST00000400819 433 ntBASIC25.36■■□□□ 1.65
SCAF11Q99590 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC25.36■■□□□ 1.65
SCAF11Q99590 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 AC138761.1-201ENST00000584393 385 ntBASIC25.36■■□□□ 1.65
SCAF11Q99590 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC25.36■■□□□ 1.65
SCAF11Q99590 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC25.36■■□□□ 1.65
SCAF11Q99590 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.36■■□□□ 1.65
SCAF11Q99590 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SCAF11Q99590 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC25.36■■□□□ 1.65
SCAF11Q99590 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SCAF11Q99590 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
SCAF11Q99590 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCAF11Q99590 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCAF11Q99590 RHOQP3-201ENST00000437982 621 ntBASIC25.35■■□□□ 1.65
SCAF11Q99590 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC25.35■■□□□ 1.65
SCAF11Q99590 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SCAF11Q99590 AC096734.2-201ENST00000562054 433 ntBASIC25.35■■□□□ 1.65
SCAF11Q99590 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC25.35■■□□□ 1.65
SCAF11Q99590 BCAR1-209ENST00000546196 1340 ntBASIC25.35■■□□□ 1.65
SCAF11Q99590 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SCAF11Q99590 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.35■■□□□ 1.65
SCAF11Q99590 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC25.35■■□□□ 1.65
SCAF11Q99590 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SCAF11Q99590 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SCAF11Q99590 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC25.35■■□□□ 1.65
SCAF11Q99590 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SCAF11Q99590 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCAF11Q99590 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SCAF11Q99590 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC25.34■■□□□ 1.65
SCAF11Q99590 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.34■■□□□ 1.65
SCAF11Q99590 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC25.34■■□□□ 1.65
SCAF11Q99590 AC092474.2-201ENST00000424288 719 ntBASIC25.34■■□□□ 1.65
SCAF11Q99590 HLA-J-202ENST00000469281 1241 ntBASIC25.34■■□□□ 1.65
SCAF11Q99590 SMN2-210ENST00000511812 867 ntTSL 2 BASIC25.34■■□□□ 1.65
SCAF11Q99590 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC25.34■■□□□ 1.65
SCAF11Q99590 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.34■■□□□ 1.65
SCAF11Q99590 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SCAF11Q99590 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCAF11Q99590 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
SCAF11Q99590 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC25.34■■□□□ 1.65
SCAF11Q99590 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms