Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP6NLQ92738 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP6NLQ92738 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.08■□□□□ 0.81
USP6NLQ92738 IGLL3P-201ENST00000412472 434 ntBASIC20.08■□□□□ 0.81
USP6NLQ92738 AL645939.2-201ENST00000427340 991 ntBASIC20.08■□□□□ 0.81
USP6NLQ92738 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.08■□□□□ 0.81
USP6NLQ92738 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.08■□□□□ 0.81
USP6NLQ92738 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.08■□□□□ 0.81
USP6NLQ92738 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.08■□□□□ 0.81
USP6NLQ92738 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
USP6NLQ92738 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.08■□□□□ 0.81
USP6NLQ92738 AC004790.2-201ENST00000623588 572 ntBASIC20.08■□□□□ 0.81
USP6NLQ92738 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.08■□□□□ 0.8
USP6NLQ92738 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP6NLQ92738 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
USP6NLQ92738 NCF1C-201ENST00000438382 1427 ntBASIC20.08■□□□□ 0.8
USP6NLQ92738 SIRPAP1-201ENST00000448467 1770 ntBASIC20.08■□□□□ 0.8
USP6NLQ92738 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP6NLQ92738 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP6NLQ92738 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.08■□□□□ 0.8
USP6NLQ92738 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP6NLQ92738 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
USP6NLQ92738 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.08■□□□□ 0.8
USP6NLQ92738 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 GPR89P-201ENST00000407924 1495 ntBASIC20.07■□□□□ 0.8
USP6NLQ92738 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.07■□□□□ 0.8
USP6NLQ92738 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
USP6NLQ92738 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.07■□□□□ 0.8
USP6NLQ92738 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
USP6NLQ92738 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.07■□□□□ 0.8
USP6NLQ92738 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.07■□□□□ 0.8
USP6NLQ92738 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
USP6NLQ92738 MIR4751-201ENST00000578027 74 ntBASIC20.07■□□□□ 0.8
USP6NLQ92738 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
USP6NLQ92738 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP6NLQ92738 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
USP6NLQ92738 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.07■□□□□ 0.8
USP6NLQ92738 AL078644.1-201ENST00000609881 752 ntBASIC20.07■□□□□ 0.8
USP6NLQ92738 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.07■□□□□ 0.8
USP6NLQ92738 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.07■□□□□ 0.8
USP6NLQ92738 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP6NLQ92738 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6NLQ92738 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.06■□□□□ 0.8
USP6NLQ92738 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP6NLQ92738 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.06■□□□□ 0.8
USP6NLQ92738 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP6NLQ92738 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.06■□□□□ 0.8
USP6NLQ92738 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.06■□□□□ 0.8
USP6NLQ92738 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6NLQ92738 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
USP6NLQ92738 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.06■□□□□ 0.8
USP6NLQ92738 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.06■□□□□ 0.8
USP6NLQ92738 AP002472.1-201ENST00000577490 586 ntBASIC20.06■□□□□ 0.8
USP6NLQ92738 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.06■□□□□ 0.8
USP6NLQ92738 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
USP6NLQ92738 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6NLQ92738 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
USP6NLQ92738 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP6NLQ92738 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.06■□□□□ 0.8
USP6NLQ92738 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.06■□□□□ 0.8
USP6NLQ92738 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.05■□□□□ 0.8
USP6NLQ92738 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
USP6NLQ92738 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.05■□□□□ 0.8
USP6NLQ92738 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.05■□□□□ 0.8
USP6NLQ92738 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.05■□□□□ 0.8
USP6NLQ92738 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.05■□□□□ 0.8
USP6NLQ92738 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.05■□□□□ 0.8
USP6NLQ92738 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.05■□□□□ 0.8
USP6NLQ92738 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
USP6NLQ92738 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.05■□□□□ 0.8
USP6NLQ92738 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.05■□□□□ 0.8
USP6NLQ92738 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
USP6NLQ92738 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
USP6NLQ92738 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP6NLQ92738 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms