Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 GK-202ENST00000378941 458 ntTSL 3 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.3□□□□□ -0.44
CSMD3Q7Z407 TSPY16P-201ENST00000449843 468 ntBASIC12.3□□□□□ -0.44
CSMD3Q7Z407 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 AL008721.1-201ENST00000609964 604 ntBASIC12.3□□□□□ -0.44
CSMD3Q7Z407 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 PMS2P4-201ENST00000412466 1052 ntBASIC12.29□□□□□ -0.44
CSMD3Q7Z407 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 AC236430.1-201ENST00000402231 743 ntBASIC12.29□□□□□ -0.44
CSMD3Q7Z407 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 AC068137.2-201ENST00000605408 478 ntBASIC12.29□□□□□ -0.44
CSMD3Q7Z407 AC008761.3-201ENST00000624803 892 ntBASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD3Q7Z407 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AC025580.3-201ENST00000617932 1424 ntBASIC12.28□□□□□ -0.44
CSMD3Q7Z407 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.28□□□□□ -0.44
CSMD3Q7Z407 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AC005332.7-201ENST00000614046 2005 ntBASIC12.28□□□□□ -0.44
CSMD3Q7Z407 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AC122714.2-201ENST00000502787 707 ntBASIC12.28□□□□□ -0.44
CSMD3Q7Z407 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CSMD3Q7Z407 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms