Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.9■□□□□ 0.14
ACTA1P68133 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.9■□□□□ 0.14
ACTA1P68133 RPS2P55-201ENST00000397318 883 ntBASIC15.9■□□□□ 0.14
ACTA1P68133 DDX43P3-201ENST00000441064 443 ntBASIC15.9■□□□□ 0.14
ACTA1P68133 AC107956.1-201ENST00000494359 873 ntBASIC15.9■□□□□ 0.14
ACTA1P68133 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.9■□□□□ 0.14
ACTA1P68133 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.9■□□□□ 0.14
ACTA1P68133 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 AC092338.2-201ENST00000568827 1415 ntBASIC15.9■□□□□ 0.14
ACTA1P68133 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ACTA1P68133 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACTA1P68133 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ACTA1P68133 AC011676.5-201ENST00000624864 2660 ntBASIC15.9■□□□□ 0.14
ACTA1P68133 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
ACTA1P68133 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
ACTA1P68133 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
ACTA1P68133 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.89■□□□□ 0.13
ACTA1P68133 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
ACTA1P68133 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ACTA1P68133 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ACTA1P68133 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 LINC00167-201ENST00000530583 1419 ntBASIC15.89■□□□□ 0.13
ACTA1P68133 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.89■□□□□ 0.13
ACTA1P68133 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.89■□□□□ 0.13
ACTA1P68133 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ACTA1P68133 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.89■□□□□ 0.13
ACTA1P68133 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.89■□□□□ 0.13
ACTA1P68133 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.89■□□□□ 0.13
ACTA1P68133 AC113410.3-201ENST00000623366 203 ntBASIC15.89■□□□□ 0.13
ACTA1P68133 AC116562.4-202ENST00000641738 218 ntBASIC15.89■□□□□ 0.13
ACTA1P68133 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.89■□□□□ 0.13
ACTA1P68133 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.89■□□□□ 0.13
ACTA1P68133 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
ACTA1P68133 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACTA1P68133 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.89■□□□□ 0.13
ACTA1P68133 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.88■□□□□ 0.13
ACTA1P68133 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
ACTA1P68133 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ACTA1P68133 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.88■□□□□ 0.13
ACTA1P68133 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ACTA1P68133 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.88■□□□□ 0.13
ACTA1P68133 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.88■□□□□ 0.13
ACTA1P68133 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ACTA1P68133 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.88■□□□□ 0.13
ACTA1P68133 AC233702.5-201ENST00000584107 538 ntBASIC15.88■□□□□ 0.13
ACTA1P68133 AC026471.5-201ENST00000615068 467 ntBASIC15.88■□□□□ 0.13
ACTA1P68133 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.88■□□□□ 0.13
ACTA1P68133 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACTA1P68133 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
ACTA1P68133 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
ACTA1P68133 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms