Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH13P55290 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH13P55290 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 AL023806.1-201ENST00000603994 1649 ntBASIC17.45■□□□□ 0.38
CDH13P55290 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH13P55290 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 PRORSD1P-202ENST00000563365 2154 ntBASIC17.45■□□□□ 0.38
CDH13P55290 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH13P55290 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
CDH13P55290 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH13P55290 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 LINC00304-203ENST00000565008 1864 ntBASIC17.44■□□□□ 0.38
CDH13P55290 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 CROCCP2-202ENST00000412962 2773 ntBASIC17.44■□□□□ 0.38
CDH13P55290 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
CDH13P55290 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH13P55290 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 AC087499.1-201ENST00000418141 1075 ntBASIC17.44■□□□□ 0.38
CDH13P55290 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH13P55290 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH13P55290 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH13P55290 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH13P55290 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CDH13P55290 AC079602.3-201ENST00000623931 403 ntBASIC17.44■□□□□ 0.38
CDH13P55290 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH13P55290 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH13P55290 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH13P55290 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDH13P55290 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH13P55290 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDH13P55290 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH13P55290 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH13P55290 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 AC024563.2-201ENST00000603282 481 ntBASIC17.43■□□□□ 0.38
CDH13P55290 AC145285.6-201ENST00000604632 637 ntBASIC17.43■□□□□ 0.38
CDH13P55290 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDH13P55290 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CDH13P55290 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH13P55290 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 AC099398.1-201ENST00000567919 2776 ntBASIC17.42■□□□□ 0.38
CDH13P55290 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 AP001094.4-201ENST00000579008 2176 ntBASIC17.42■□□□□ 0.38
CDH13P55290 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH13P55290 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDH13P55290 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH13P55290 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDH13P55290 AC022211.2-201ENST00000585075 2527 ntBASIC17.42■□□□□ 0.38
CDH13P55290 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH13P55290 RASA4DP-201ENST00000460726 1199 ntBASIC17.42■□□□□ 0.38
CDH13P55290 AC034232.1-201ENST00000506026 1064 ntBASIC17.42■□□□□ 0.38
CDH13P55290 AC113404.2-201ENST00000507884 177 ntBASIC17.42■□□□□ 0.38
CDH13P55290 AC010203.1-204ENST00000548782 407 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms