Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 NKAPP1-205ENST00000585790 367 ntBASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 FAM215A-202ENST00000632077 792 ntBASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV5A0A0B4J1U4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
TRGV5A0A0B4J1U4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TRGV5A0A0B4J1U4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRGV5A0A0B4J1U4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRGV5A0A0B4J1U4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 RPS2P1-201ENST00000434010 821 ntBASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 HNRNPDP1-201ENST00000439535 754 ntBASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 AC139887.3-201ENST00000568585 713 ntBASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 PMPCAP1-201ENST00000508114 1576 ntBASIC15.95■□□□□ 0.14
TRGV5A0A0B4J1U4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 OR7E14P-202ENST00000530490 1290 ntBASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 MTDHP4-201ENST00000600287 670 ntBASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 MIR7706-201ENST00000613747 67 ntBASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 AD001527.2-201ENST00000622994 785 ntBASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV5A0A0B4J1U4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms