Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AC119751.3-201ENST00000399720 670 ntBASIC19.92■□□□□ 0.78
RNF39Q9H2S5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 RPP40P1-201ENST00000426762 456 ntBASIC19.92■□□□□ 0.78
RNF39Q9H2S5 CETN4P-201ENST00000432407 469 ntBASIC19.92■□□□□ 0.78
RNF39Q9H2S5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AC112191.1-201ENST00000523689 701 ntBASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 MTND2P41-201ENST00000637599 773 ntBASIC19.92■□□□□ 0.78
RNF39Q9H2S5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF39Q9H2S5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 Z83846.1-201ENST00000446798 265 ntBASIC19.91■□□□□ 0.78
RNF39Q9H2S5 LINC00265-3P-201ENST00000447588 903 ntBASIC19.91■□□□□ 0.78
RNF39Q9H2S5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 TOB2P1-201ENST00000469761 992 ntBASIC19.91■□□□□ 0.78
RNF39Q9H2S5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 AP000867.3-201ENST00000524675 377 ntBASIC19.91■□□□□ 0.78
RNF39Q9H2S5 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 IGHV3-41-201ENST00000613121 348 ntBASIC19.91■□□□□ 0.78
RNF39Q9H2S5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF39Q9H2S5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 USP9YP21-201ENST00000420603 432 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 MTND4P30-201ENST00000450281 899 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 UNC93B7-201ENST00000509439 705 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 AC009065.1-201ENST00000564055 1225 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 AC005393.1-201ENST00000617916 584 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 MYLKP1-201ENST00000509077 1580 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 SDHAP2-201ENST00000455183 2001 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms