Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC168Q8NDH2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 AL032819.2-201ENST00000624543 2162 ntBASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 BASP1P1-201ENST00000430708 665 ntBASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 AC140878.1-201ENST00000565277 250 ntBASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 REXO1L3P-201ENST00000622202 1288 ntBASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC168Q8NDH2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 MIR943-201ENST00000401286 94 ntBASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 RN7SL692P-201ENST00000464677 288 ntBASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 AC068587.9-201ENST00000641814 219 ntBASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 AL499627.1-201ENST00000569373 2188 ntBASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 ATP5G2P4-201ENST00000442175 420 ntBASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 AC069335.1-201ENST00000489972 472 ntBASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 AL390754.1-201ENST00000619088 582 ntBASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC168Q8NDH2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC168Q8NDH2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms