Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd4Q8CC84 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lysmd4Q8CC84 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lysmd4Q8CC84 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.4□□□□□ -0.27
Lysmd4Q8CC84 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd4Q8CC84 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd4Q8CC84 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms