Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.94□□□□□ -0.66
HSPG2P98160 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.94□□□□□ -0.66
HSPG2P98160 AC084121.4-201ENST00000641598 221 ntBASIC10.94□□□□□ -0.66
HSPG2P98160 AF228730.8-201ENST00000642140 221 ntBASIC10.94□□□□□ -0.66
HSPG2P98160 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC10.94□□□□□ -0.66
HSPG2P98160 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.94□□□□□ -0.66
HSPG2P98160 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HSPG2P98160 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC10.94□□□□□ -0.66
HSPG2P98160 AC100803.2-201ENST00000562459 1963 ntBASIC10.94□□□□□ -0.66
HSPG2P98160 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HSPG2P98160 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC10.94□□□□□ -0.66
HSPG2P98160 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HSPG2P98160 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HSPG2P98160 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.94□□□□□ -0.66
HSPG2P98160 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HSPG2P98160 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.94□□□□□ -0.66
HSPG2P98160 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
HSPG2P98160 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HSPG2P98160 TBC1D3P5-201ENST00000579401 1545 ntBASIC10.94□□□□□ -0.66
HSPG2P98160 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.93□□□□□ -0.66
HSPG2P98160 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.93□□□□□ -0.66
HSPG2P98160 API5-211ENST00000534695 560 ntTSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.93□□□□□ -0.66
HSPG2P98160 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.93□□□□□ -0.66
HSPG2P98160 AL135744.1-201ENST00000565098 629 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 AC119751.2-201ENST00000504529 210 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.93□□□□□ -0.66
HSPG2P98160 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.93□□□□□ -0.66
HSPG2P98160 AC112191.1-201ENST00000523689 701 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.93□□□□□ -0.66
HSPG2P98160 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 STK25P1-201ENST00000585406 838 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 AL158211.3-201ENST00000607385 239 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
HSPG2P98160 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 SPDYE11-202ENST00000450699 704 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.93□□□□□ -0.66
HSPG2P98160 SPDYE9P-201ENST00000570642 692 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 SPDYE10P-202ENST00000612005 668 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 SPDYE8P-202ENST00000612377 668 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC10.93□□□□□ -0.66
HSPG2P98160 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
HSPG2P98160 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.93□□□□□ -0.66
HSPG2P98160 DDX43P3-201ENST00000441064 443 ntBASIC10.93□□□□□ -0.66
HSPG2P98160 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.93□□□□□ -0.66
HSPG2P98160 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HSPG2P98160 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 MYLKP1-201ENST00000509077 1580 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 FUT8-AS1-201ENST00000621019 1521 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 AC009477.1-201ENST00000452936 217 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.92□□□□□ -0.66
HSPG2P98160 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC10.92□□□□□ -0.66
HSPG2P98160 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 SNAI3-AS1-205ENST00000568633 2096 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.92□□□□□ -0.66
HSPG2P98160 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.92□□□□□ -0.66
HSPG2P98160 KRT17P8-201ENST00000540749 863 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 KRT8P23-201ENST00000560090 1207 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC10.92□□□□□ -0.66
HSPG2P98160 AC007064.4-201ENST00000637740 555 ntBASIC10.92□□□□□ -0.66
HSPG2P98160 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.92□□□□□ -0.66
HSPG2P98160 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
HSPG2P98160 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms