Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC138649.4-201ENST00000612222 287 ntBASIC19.82■□□□□ 0.76
BRCA2P51587 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
BRCA2P51587 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.82■□□□□ 0.76
BRCA2P51587 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
BRCA2P51587 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.82■□□□□ 0.76
BRCA2P51587 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRCA2P51587 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.82■□□□□ 0.76
BRCA2P51587 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BRCA2P51587 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
BRCA2P51587 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
BRCA2P51587 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.81■□□□□ 0.76
BRCA2P51587 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCA2P51587 AC245100.3-201ENST00000441281 285 ntBASIC19.81■□□□□ 0.76
BRCA2P51587 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.81■□□□□ 0.76
BRCA2P51587 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
BRCA2P51587 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
BRCA2P51587 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCA2P51587 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.81■□□□□ 0.76
BRCA2P51587 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.81■□□□□ 0.76
BRCA2P51587 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 AC096734.2-201ENST00000562054 433 ntBASIC19.81■□□□□ 0.76
BRCA2P51587 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
BRCA2P51587 AC004790.2-201ENST00000623588 572 ntBASIC19.81■□□□□ 0.76
BRCA2P51587 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCA2P51587 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.81■□□□□ 0.76
BRCA2P51587 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCA2P51587 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCA2P51587 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.8■□□□□ 0.76
BRCA2P51587 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCA2P51587 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRCA2P51587 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCA2P51587 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCA2P51587 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.8■□□□□ 0.76
BRCA2P51587 MRPS18AP1-201ENST00000414458 589 ntBASIC19.8■□□□□ 0.76
BRCA2P51587 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCA2P51587 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.8■□□□□ 0.76
BRCA2P51587 AC008677.1-201ENST00000519230 1561 ntBASIC19.8■□□□□ 0.76
BRCA2P51587 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
BRCA2P51587 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCA2P51587 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BRCA2P51587 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCA2P51587 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCA2P51587 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.8■□□□□ 0.76
BRCA2P51587 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCA2P51587 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.8■□□□□ 0.76
BRCA2P51587 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCA2P51587 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.8■□□□□ 0.76
BRCA2P51587 AC099522.2-201ENST00000607001 744 ntBASIC19.8■□□□□ 0.76
BRCA2P51587 AC008667.4-201ENST00000607370 168 ntBASIC19.8■□□□□ 0.76
BRCA2P51587 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCA2P51587 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCA2P51587 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.79■□□□□ 0.76
BRCA2P51587 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.79■□□□□ 0.76
BRCA2P51587 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.79■□□□□ 0.76
BRCA2P51587 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 SPDYE22P-201ENST00000582158 798 ntBASIC19.79■□□□□ 0.76
BRCA2P51587 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
BRCA2P51587 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.79■□□□□ 0.76
BRCA2P51587 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.79■□□□□ 0.76
BRCA2P51587 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BRCA2P51587 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BRCA2P51587 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.79■□□□□ 0.76
BRCA2P51587 NME2P1-201ENST00000426182 414 ntBASIC19.79■□□□□ 0.76
BRCA2P51587 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 AC008687.5-201ENST00000593746 558 ntBASIC19.79■□□□□ 0.76
BRCA2P51587 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BRCA2P51587 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCA2P51587 GNAS-203ENST00000306120 1878 ntBASIC19.79■□□□□ 0.76
BRCA2P51587 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRCA2P51587 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRCA2P51587 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BRCA2P51587 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
BRCA2P51587 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms