Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CX3CR1P49238 AC010203.1-204ENST00000548782 407 ntBASIC15.72■□□□□ 0.11
CX3CR1P49238 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.72■□□□□ 0.11
CX3CR1P49238 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.72■□□□□ 0.11
CX3CR1P49238 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CX3CR1P49238 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CX3CR1P49238 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CX3CR1P49238 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CX3CR1P49238 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CX3CR1P49238 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CX3CR1P49238 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.71■□□□□ 0.11
CX3CR1P49238 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.71■□□□□ 0.11
CX3CR1P49238 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CX3CR1P49238 RASA4DP-201ENST00000460726 1199 ntBASIC15.71■□□□□ 0.11
CX3CR1P49238 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.71■□□□□ 0.11
CX3CR1P49238 COX11P1-201ENST00000489116 835 ntBASIC15.71■□□□□ 0.11
CX3CR1P49238 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.71■□□□□ 0.11
CX3CR1P49238 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.71■□□□□ 0.11
CX3CR1P49238 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.71■□□□□ 0.11
CX3CR1P49238 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.71■□□□□ 0.11
CX3CR1P49238 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.71■□□□□ 0.11
CX3CR1P49238 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.71■□□□□ 0.11
CX3CR1P49238 AC133561.5-201ENST00000635547 218 ntBASIC15.71■□□□□ 0.11
CX3CR1P49238 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CX3CR1P49238 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CX3CR1P49238 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CX3CR1P49238 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CX3CR1P49238 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CX3CR1P49238 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CX3CR1P49238 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.71■□□□□ 0.1
CX3CR1P49238 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CX3CR1P49238 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CX3CR1P49238 AC012313.1-201ENST00000593393 3059 ntBASIC15.71■□□□□ 0.1
CX3CR1P49238 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CX3CR1P49238 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CX3CR1P49238 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.7■□□□□ 0.1
CX3CR1P49238 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.7■□□□□ 0.1
CX3CR1P49238 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.7■□□□□ 0.1
CX3CR1P49238 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CX3CR1P49238 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.7■□□□□ 0.1
CX3CR1P49238 AC024563.2-201ENST00000603282 481 ntBASIC15.7■□□□□ 0.1
CX3CR1P49238 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.7■□□□□ 0.1
CX3CR1P49238 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.7■□□□□ 0.1
CX3CR1P49238 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 AC009053.2-201ENST00000563701 2365 ntBASIC15.7■□□□□ 0.1
CX3CR1P49238 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.7■□□□□ 0.1
CX3CR1P49238 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CX3CR1P49238 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CX3CR1P49238 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CR1P49238 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CX3CR1P49238 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CX3CR1P49238 AC113404.2-201ENST00000507884 177 ntBASIC15.69■□□□□ 0.1
CX3CR1P49238 AL441883.1-201ENST00000566170 1045 ntBASIC15.69■□□□□ 0.1
CX3CR1P49238 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.69■□□□□ 0.1
CX3CR1P49238 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CX3CR1P49238 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 AL031432.5-201ENST00000641059 760 ntBASIC15.69■□□□□ 0.1
CX3CR1P49238 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.69■□□□□ 0.1
CX3CR1P49238 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.69■□□□□ 0.1
CX3CR1P49238 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms