Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.68□□□□□ -0.06
HmgclP38060 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HmgclP38060 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HmgclP38060 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.68□□□□□ -0.06
HmgclP38060 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HmgclP38060 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HmgclP38060 Gm27301-201ENSMUST00000184012 127 ntBASIC14.68□□□□□ -0.06
HmgclP38060 Gm6443-201ENSMUST00000203599 874 ntBASIC14.68□□□□□ -0.06
HmgclP38060 AW822252-206ENSMUST00000208904 237 ntBASIC14.68□□□□□ -0.06
HmgclP38060 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.68□□□□□ -0.06
HmgclP38060 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.68□□□□□ -0.06
HmgclP38060 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HmgclP38060 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HmgclP38060 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HmgclP38060 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HmgclP38060 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.67□□□□□ -0.06
HmgclP38060 Gm12260-201ENSMUST00000122447 411 ntBASIC14.67□□□□□ -0.06
HmgclP38060 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.67□□□□□ -0.06
HmgclP38060 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HmgclP38060 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.67□□□□□ -0.06
HmgclP38060 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HmgclP38060 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HmgclP38060 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.67□□□□□ -0.06
HmgclP38060 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HmgclP38060 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.66□□□□□ -0.06
HmgclP38060 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
HmgclP38060 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HmgclP38060 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.66□□□□□ -0.06
HmgclP38060 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.66□□□□□ -0.06
HmgclP38060 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.66□□□□□ -0.06
HmgclP38060 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.66□□□□□ -0.06
HmgclP38060 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
HmgclP38060 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HmgclP38060 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.66□□□□□ -0.06
HmgclP38060 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HmgclP38060 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.66□□□□□ -0.06
HmgclP38060 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HmgclP38060 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HmgclP38060 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HmgclP38060 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HmgclP38060 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms