Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TSPAN3O60637 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.39■□□□□ 0.54
TSPAN3O60637 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.39■□□□□ 0.54
TSPAN3O60637 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.39■□□□□ 0.54
TSPAN3O60637 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.39■□□□□ 0.53
TSPAN3O60637 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TSPAN3O60637 SAPCD2P3-201ENST00000455031 850 ntBASIC18.39■□□□□ 0.53
TSPAN3O60637 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 AC009078.2-202ENST00000463353 338 ntBASIC18.39■□□□□ 0.53
TSPAN3O60637 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.39■□□□□ 0.53
TSPAN3O60637 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.39■□□□□ 0.53
TSPAN3O60637 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.39■□□□□ 0.53
TSPAN3O60637 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.39■□□□□ 0.53
TSPAN3O60637 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 AC011467.2-201ENST00000598425 242 ntBASIC18.39■□□□□ 0.53
TSPAN3O60637 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.39■□□□□ 0.53
TSPAN3O60637 REXO1L6P-202ENST00000619970 1078 ntBASIC18.39■□□□□ 0.53
TSPAN3O60637 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TSPAN3O60637 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TSPAN3O60637 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TSPAN3O60637 INTS4P1-201ENST00000438455 1935 ntBASIC18.39■□□□□ 0.53
TSPAN3O60637 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.39■□□□□ 0.53
TSPAN3O60637 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.39■□□□□ 0.53
TSPAN3O60637 AC100803.2-201ENST00000562459 1963 ntBASIC18.39■□□□□ 0.53
TSPAN3O60637 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN3O60637 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.39■□□□□ 0.53
TSPAN3O60637 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.39■□□□□ 0.53
TSPAN3O60637 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.38■□□□□ 0.53
TSPAN3O60637 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.38■□□□□ 0.53
TSPAN3O60637 AC007967.3-201ENST00000434308 558 ntBASIC18.38■□□□□ 0.53
TSPAN3O60637 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 AC104692.2-201ENST00000603054 253 ntBASIC18.38■□□□□ 0.53
TSPAN3O60637 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.38■□□□□ 0.53
TSPAN3O60637 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN3O60637 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
TSPAN3O60637 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN3O60637 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TSPAN3O60637 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 AC007613.1-201ENST00000572811 2597 ntBASIC18.37■□□□□ 0.53
TSPAN3O60637 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TSPAN3O60637 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TSPAN3O60637 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TSPAN3O60637 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.37■□□□□ 0.53
TSPAN3O60637 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.37■□□□□ 0.53
TSPAN3O60637 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.37■□□□□ 0.53
TSPAN3O60637 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.37■□□□□ 0.53
TSPAN3O60637 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.37■□□□□ 0.53
TSPAN3O60637 AL121912.1-201ENST00000603683 238 ntBASIC18.37■□□□□ 0.53
TSPAN3O60637 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.37■□□□□ 0.53
TSPAN3O60637 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.37■□□□□ 0.53
TSPAN3O60637 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms