Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CUX2O14529 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC30.28■■■□□ 2.44
CUX2O14529 ME2-218ENST00000640965 2476 ntTSL 5 BASIC30.28■■■□□ 2.44
CUX2O14529 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CUX2O14529 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
CUX2O14529 AC005237.2-201ENST00000434368 219 ntBASIC30.28■■■□□ 2.44
CUX2O14529 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC30.28■■■□□ 2.44
CUX2O14529 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC30.28■■■□□ 2.44
CUX2O14529 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC30.28■■■□□ 2.44
CUX2O14529 AC099522.2-201ENST00000607001 744 ntBASIC30.28■■■□□ 2.44
CUX2O14529 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC30.28■■■□□ 2.44
CUX2O14529 AC099343.3-201ENST00000605834 2503 ntBASIC30.28■■■□□ 2.44
CUX2O14529 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC30.28■■■□□ 2.44
CUX2O14529 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CUX2O14529 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CUX2O14529 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CUX2O14529 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC30.28■■■□□ 2.44
CUX2O14529 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC30.27■■■□□ 2.44
CUX2O14529 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC30.27■■■□□ 2.44
CUX2O14529 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC30.27■■■□□ 2.44
CUX2O14529 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 FAM58DP-201ENST00000428076 619 ntBASIC30.27■■■□□ 2.44
CUX2O14529 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC30.27■■■□□ 2.44
CUX2O14529 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CUX2O14529 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC30.27■■■□□ 2.44
CUX2O14529 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC30.27■■■□□ 2.44
CUX2O14529 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC30.27■■■□□ 2.44
CUX2O14529 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
CUX2O14529 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC30.27■■■□□ 2.44
CUX2O14529 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC30.27■■■□□ 2.44
CUX2O14529 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CUX2O14529 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
CUX2O14529 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CUX2O14529 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC30.26■■■□□ 2.44
CUX2O14529 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CUX2O14529 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CUX2O14529 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC30.26■■■□□ 2.44
CUX2O14529 GIMAP3P-201ENST00000495150 836 ntBASIC30.26■■■□□ 2.44
CUX2O14529 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC30.26■■■□□ 2.44
CUX2O14529 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CUX2O14529 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC30.26■■■□□ 2.44
CUX2O14529 SPTSSB-204ENST00000617024 1292 ntBASIC30.26■■■□□ 2.44
CUX2O14529 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC30.26■■■□□ 2.43
CUX2O14529 LINC00602-201ENST00000629776 2065 ntBASIC30.26■■■□□ 2.43
CUX2O14529 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CUX2O14529 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC30.26■■■□□ 2.43
CUX2O14529 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CUX2O14529 PGF-202ENST00000405431 666 ntTSL 5 BASIC30.25■■■□□ 2.43
CUX2O14529 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 NAA38-206ENST00000576384 424 ntTSL 2 BASIC30.25■■■□□ 2.43
CUX2O14529 CYB561-217ENST00000582997 877 ntTSL 5 BASIC30.25■■■□□ 2.43
CUX2O14529 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC30.25■■■□□ 2.43
CUX2O14529 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC30.25■■■□□ 2.43
CUX2O14529 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC30.25■■■□□ 2.43
CUX2O14529 AL512638.1-201ENST00000457493 794 ntBASIC30.25■■■□□ 2.43
CUX2O14529 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC30.25■■■□□ 2.43
CUX2O14529 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CUX2O14529 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CUX2O14529 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CUX2O14529 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC30.24■■■□□ 2.43
CUX2O14529 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC30.24■■■□□ 2.43
CUX2O14529 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CUX2O14529 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC30.24■■■□□ 2.43
CUX2O14529 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC30.24■■■□□ 2.43
CUX2O14529 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
CUX2O14529 AL020989.1-201ENST00000422979 469 ntBASIC30.24■■■□□ 2.43
CUX2O14529 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC30.24■■■□□ 2.43
CUX2O14529 AC092580.3-201ENST00000430932 139 ntBASIC30.24■■■□□ 2.43
CUX2O14529 GPER1-207ENST00000619052 571 ntTSL 2 BASIC30.24■■■□□ 2.43
CUX2O14529 IGHV3-72-202ENST00000621503 303 ntBASIC30.24■■■□□ 2.43
CUX2O14529 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CUX2O14529 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC30.24■■■□□ 2.43
CUX2O14529 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CUX2O14529 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CUX2O14529 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CUX2O14529 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC30.23■■■□□ 2.43
CUX2O14529 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CUX2O14529 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC30.23■■■□□ 2.43
CUX2O14529 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC30.23■■■□□ 2.43
CUX2O14529 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CUX2O14529 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC30.23■■■□□ 2.43
CUX2O14529 GGTLC5P-201ENST00000617623 998 ntBASIC30.23■■■□□ 2.43
CUX2O14529 RETN-203ENST00000629642 400 ntTSL 5 BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms