Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CCR12P-201ENST00000446203 998 ntBASIC18.57■□□□□ 0.56
CCDC188H7C350 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 BX088651.1-201ENST00000540551 451 ntBASIC18.57■□□□□ 0.56
CCDC188H7C350 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC188H7C350 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
CCDC188H7C350 AP001412.1-201ENST00000608405 714 ntBASIC18.57■□□□□ 0.56
CCDC188H7C350 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.57■□□□□ 0.56
CCDC188H7C350 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC188H7C350 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC188H7C350 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC188H7C350 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC188H7C350 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC188H7C350 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC188H7C350 AC016396.2-201ENST00000562575 1417 ntBASIC18.57■□□□□ 0.56
CCDC188H7C350 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC188H7C350 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC188H7C350 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC188H7C350 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 ABHD17AP1-201ENST00000358206 933 ntBASIC18.56■□□□□ 0.56
CCDC188H7C350 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC188H7C350 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC188H7C350 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC188H7C350 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC188H7C350 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC188H7C350 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC188H7C350 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
CCDC188H7C350 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.55■□□□□ 0.56
CCDC188H7C350 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC188H7C350 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC188H7C350 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC188H7C350 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC188H7C350 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.55■□□□□ 0.56
CCDC188H7C350 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC188H7C350 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
CCDC188H7C350 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC188H7C350 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC188H7C350 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CCDC188H7C350 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.54■□□□□ 0.56
CCDC188H7C350 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC188H7C350 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CCDC188H7C350 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms