Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 KRT17P2-201ENST00000300992 1314 ntBASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC012313.1-201ENST00000593393 3059 ntBASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHANK2-AS3Q9BTD1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHANK2-AS3Q9BTD1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHANK2-AS3Q9BTD1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHANK2-AS3Q9BTD1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
SHANK2-AS3Q9BTD1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHANK2-AS3Q9BTD1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 INGX-201ENST00000359239 846 ntBASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AL355075.4-201ENST00000554988 638 ntBASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AP001094.4-201ENST00000579008 2176 ntBASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 LINC01451-201ENST00000623792 534 ntBASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 CROCCP2-202ENST00000412962 2773 ntBASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.77□□□□□ -0.21
SHANK2-AS3Q9BTD1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SHANK2-AS3Q9BTD1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms