Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cstf3Q99LI7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.46□□□□□ -0.09
Cstf3Q99LI7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Gm7230-201ENSMUST00000173026 815 ntBASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Gm5682-201ENSMUST00000173402 505 ntBASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf3Q99LI7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf3Q99LI7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.45□□□□□ -0.1
Cstf3Q99LI7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Gm43767-201ENSMUST00000198933 381 ntBASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf3Q99LI7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Gm7787-201ENSMUST00000216858 688 ntBASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cstf3Q99LI7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms