Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.5■□□□□ 0.39
CPSF7Q8N684 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPSF7Q8N684 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPSF7Q8N684 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.5■□□□□ 0.39
CPSF7Q8N684 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.49■□□□□ 0.39
CPSF7Q8N684 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 DUTP2-201ENST00000519164 463 ntBASIC17.49■□□□□ 0.39
CPSF7Q8N684 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPSF7Q8N684 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CPSF7Q8N684 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 AC092338.2-201ENST00000568827 1415 ntBASIC17.48■□□□□ 0.39
CPSF7Q8N684 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.48■□□□□ 0.39
CPSF7Q8N684 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.48■□□□□ 0.39
CPSF7Q8N684 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 TNRC18P3-201ENST00000441896 2691 ntBASIC17.48■□□□□ 0.39
CPSF7Q8N684 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.48■□□□□ 0.39
CPSF7Q8N684 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.48■□□□□ 0.39
CPSF7Q8N684 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPSF7Q8N684 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.47■□□□□ 0.39
CPSF7Q8N684 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 TSPY17P-201ENST00000450329 467 ntBASIC17.47■□□□□ 0.39
CPSF7Q8N684 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 MIR3180-5-201ENST00000583743 153 ntBASIC17.47■□□□□ 0.39
CPSF7Q8N684 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 NTF6B-201ENST00000591913 560 ntBASIC17.47■□□□□ 0.39
CPSF7Q8N684 AL023803.3-201ENST00000615559 522 ntBASIC17.47■□□□□ 0.39
CPSF7Q8N684 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms