Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 HMGN1P19-201ENST00000436976 333 ntBASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 CROCCP3-202ENST00000420820 1947 ntBASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 AC022898.2-201ENST00000616822 1312 ntBASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM71Q2Q1W2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM71Q2Q1W2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 DNAJB3-202ENST00000449667 1266 ntBASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 AL355385.1-201ENST00000606123 409 ntBASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 AC019129.2-201ENST00000609837 1235 ntBASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 AC079781.4-201ENST00000641908 219 ntBASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM71Q2Q1W2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
TRIM71Q2Q1W2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM71Q2Q1W2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AP006288.1-201ENST00000446065 395 ntBASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AC027796.2-201ENST00000575326 344 ntBASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AC092865.6-201ENST00000642101 219 ntBASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM71Q2Q1W2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM71Q2Q1W2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM71Q2Q1W2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM71Q2Q1W2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM71Q2Q1W2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms