Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 ATP5G1P1-201ENST00000448724 379 ntBASIC17.25■□□□□ 0.35
HMGCS1Q01581 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AC005363.2-201ENST00000618631 242 ntBASIC17.25■□□□□ 0.35
HMGCS1Q01581 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCS1Q01581 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMGCS1Q01581 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 AC024563.2-201ENST00000603282 481 ntBASIC17.24■□□□□ 0.35
HMGCS1Q01581 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 AC020916.1-201ENST00000587762 1774 ntBASIC17.24■□□□□ 0.35
HMGCS1Q01581 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 AL391807.1-203ENST00000604392 2365 ntBASIC17.24■□□□□ 0.35
HMGCS1Q01581 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCS1Q01581 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCS1Q01581 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.23■□□□□ 0.35
HMGCS1Q01581 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 SPDYE15P-201ENST00000424157 909 ntBASIC17.23■□□□□ 0.35
HMGCS1Q01581 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 COX11P1-201ENST00000489116 835 ntBASIC17.23■□□□□ 0.35
HMGCS1Q01581 AC113404.2-201ENST00000507884 177 ntBASIC17.23■□□□□ 0.35
HMGCS1Q01581 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 AL136038.4-201ENST00000603606 1261 ntBASIC17.23■□□□□ 0.35
HMGCS1Q01581 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCS1Q01581 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCS1Q01581 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms