Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.87■□□□□ 0.61
HTRA4P83105 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.87■□□□□ 0.61
HTRA4P83105 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 FAM58CP-201ENST00000435741 640 ntBASIC18.87■□□□□ 0.61
HTRA4P83105 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.87■□□□□ 0.61
HTRA4P83105 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.87■□□□□ 0.61
HTRA4P83105 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.87■□□□□ 0.61
HTRA4P83105 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.87■□□□□ 0.61
HTRA4P83105 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HTRA4P83105 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HTRA4P83105 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.87■□□□□ 0.61
HTRA4P83105 STK25P1-201ENST00000585406 838 ntBASIC18.87■□□□□ 0.61
HTRA4P83105 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTRA4P83105 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA4P83105 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.86■□□□□ 0.61
HTRA4P83105 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
HTRA4P83105 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.86■□□□□ 0.61
HTRA4P83105 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA4P83105 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
HTRA4P83105 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HTRA4P83105 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA4P83105 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.86■□□□□ 0.61
HTRA4P83105 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA4P83105 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 AL035633.1-201ENST00000406139 838 ntBASIC18.86■□□□□ 0.61
HTRA4P83105 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.86■□□□□ 0.61
HTRA4P83105 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA4P83105 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA4P83105 AL353135.1-201ENST00000606729 504 ntBASIC18.86■□□□□ 0.61
HTRA4P83105 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HTRA4P83105 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA4P83105 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA4P83105 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 AC025580.3-201ENST00000617932 1424 ntBASIC18.85■□□□□ 0.61
HTRA4P83105 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.85■□□□□ 0.61
HTRA4P83105 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HTRA4P83105 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.85■□□□□ 0.61
HTRA4P83105 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.85■□□□□ 0.61
HTRA4P83105 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HTRA4P83105 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.85■□□□□ 0.61
HTRA4P83105 AL513210.1-201ENST00000629608 234 ntBASIC18.85■□□□□ 0.61
HTRA4P83105 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.85■□□□□ 0.61
HTRA4P83105 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA4P83105 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.84■□□□□ 0.61
HTRA4P83105 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
HTRA4P83105 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HTRA4P83105 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.84■□□□□ 0.61
HTRA4P83105 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HTRA4P83105 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.84■□□□□ 0.61
HTRA4P83105 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.84■□□□□ 0.61
HTRA4P83105 AC109462.3-201ENST00000573934 613 ntBASIC18.84■□□□□ 0.61
HTRA4P83105 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.84■□□□□ 0.61
HTRA4P83105 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.84■□□□□ 0.61
HTRA4P83105 AC091812.2-201ENST00000619081 385 ntBASIC18.84■□□□□ 0.61
HTRA4P83105 AC007064.4-201ENST00000637740 555 ntBASIC18.84■□□□□ 0.61
HTRA4P83105 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.84■□□□□ 0.61
HTRA4P83105 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.84■□□□□ 0.61
HTRA4P83105 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.84■□□□□ 0.61
HTRA4P83105 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
HTRA4P83105 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA4P83105 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms