Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTNAP1P78357 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNTNAP1P78357 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNTNAP1P78357 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTNAP1P78357 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.15■□□□□ 0.98
CNTNAP1P78357 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTNAP1P78357 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.14■□□□□ 0.98
CNTNAP1P78357 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNTNAP1P78357 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.14■□□□□ 0.98
CNTNAP1P78357 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.14■□□□□ 0.98
CNTNAP1P78357 VN2R19P-201ENST00000442399 1052 ntBASIC21.14■□□□□ 0.98
CNTNAP1P78357 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.14■□□□□ 0.98
CNTNAP1P78357 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.14■□□□□ 0.98
CNTNAP1P78357 MIR4751-201ENST00000578027 74 ntBASIC21.14■□□□□ 0.98
CNTNAP1P78357 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNTNAP1P78357 AL513210.1-201ENST00000629608 234 ntBASIC21.14■□□□□ 0.98
CNTNAP1P78357 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 SIGLEC16-201ENST00000599858 1437 ntBASIC21.14■□□□□ 0.97
CNTNAP1P78357 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.14■□□□□ 0.97
CNTNAP1P78357 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP1P78357 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
CNTNAP1P78357 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CNTNAP1P78357 PHGDH-209ENST00000641074 1780 ntBASIC21.13■□□□□ 0.97
CNTNAP1P78357 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 SPDYE21P-201ENST00000413323 827 ntBASIC21.13■□□□□ 0.97
CNTNAP1P78357 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 ACTG1P14-201ENST00000446382 1122 ntBASIC21.13■□□□□ 0.97
CNTNAP1P78357 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 TERF1P3-201ENST00000505638 1227 ntBASIC21.13■□□□□ 0.97
CNTNAP1P78357 AC109322.1-201ENST00000524499 1264 ntBASIC21.13■□□□□ 0.97
CNTNAP1P78357 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP1P78357 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.13■□□□□ 0.97
CNTNAP1P78357 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.12■□□□□ 0.97
CNTNAP1P78357 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 FAM86GP-201ENST00000448322 971 ntBASIC21.12■□□□□ 0.97
CNTNAP1P78357 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.12■□□□□ 0.97
CNTNAP1P78357 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTNAP1P78357 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 PDPK2P-202ENST00000562415 1191 ntBASIC21.12■□□□□ 0.97
CNTNAP1P78357 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.12■□□□□ 0.97
CNTNAP1P78357 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CNTNAP1P78357 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.12■□□□□ 0.97
CNTNAP1P78357 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP1P78357 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTNAP1P78357 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 AC093520.2-201ENST00000561830 333 ntBASIC21.11■□□□□ 0.97
CNTNAP1P78357 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms