Protein–RNA interactions for Protein: P26842

CD27, CD27 antigen, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD27P26842 AC003669.1-201ENST00000334569 611 ntBASIC17.45■□□□□ 0.38
CD27P26842 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD27P26842 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD27P26842 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD27P26842 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.45■□□□□ 0.38
CD27P26842 AC023274.1-201ENST00000418278 595 ntBASIC17.45■□□□□ 0.38
CD27P26842 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.45■□□□□ 0.38
CD27P26842 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CD27P26842 SIGLEC30P-201ENST00000455569 941 ntBASIC17.45■□□□□ 0.38
CD27P26842 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.45■□□□□ 0.38
CD27P26842 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.45■□□□□ 0.38
CD27P26842 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.45■□□□□ 0.38
CD27P26842 AC116407.2-201ENST00000613639 860 ntBASIC17.45■□□□□ 0.38
CD27P26842 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CD27P26842 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD27P26842 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.45■□□□□ 0.38
CD27P26842 NCF1C-201ENST00000438382 1427 ntBASIC17.45■□□□□ 0.38
CD27P26842 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD27P26842 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD27P26842 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD27P26842 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.45■□□□□ 0.38
CD27P26842 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 AL096828.2-201ENST00000567259 1965 ntBASIC17.44■□□□□ 0.38
CD27P26842 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CD27P26842 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CD27P26842 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.44■□□□□ 0.38
CD27P26842 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CD27P26842 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.44■□□□□ 0.38
CD27P26842 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.44■□□□□ 0.38
CD27P26842 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.44■□□□□ 0.38
CD27P26842 KLF4P1-201ENST00000412782 1185 ntBASIC17.44■□□□□ 0.38
CD27P26842 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.44■□□□□ 0.38
CD27P26842 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.44■□□□□ 0.38
CD27P26842 AC004967.1-201ENST00000453589 447 ntBASIC17.44■□□□□ 0.38
CD27P26842 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.44■□□□□ 0.38
CD27P26842 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.44■□□□□ 0.38
CD27P26842 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.44■□□□□ 0.38
CD27P26842 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
CD27P26842 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 AP001160.2-201ENST00000596071 487 ntBASIC17.44■□□□□ 0.38
CD27P26842 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.44■□□□□ 0.38
CD27P26842 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.44■□□□□ 0.38
CD27P26842 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.44■□□□□ 0.38
CD27P26842 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.44■□□□□ 0.38
CD27P26842 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD27P26842 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.44■□□□□ 0.38
CD27P26842 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CD27P26842 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.44■□□□□ 0.38
CD27P26842 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.44■□□□□ 0.38
CD27P26842 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CD27P26842 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.43■□□□□ 0.38
CD27P26842 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 ELK2BP-201ENST00000415014 1224 ntBASIC17.43■□□□□ 0.38
CD27P26842 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.43■□□□□ 0.38
CD27P26842 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.43■□□□□ 0.38
CD27P26842 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.43■□□□□ 0.38
CD27P26842 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.43■□□□□ 0.38
CD27P26842 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.43■□□□□ 0.38
CD27P26842 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CD27P26842 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CD27P26842 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.43■□□□□ 0.38
CD27P26842 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.43■□□□□ 0.38
CD27P26842 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD27P26842 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD27P26842 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD27P26842 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD27P26842 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CD27P26842 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD27P26842 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD27P26842 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD27P26842 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CD27P26842 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD27P26842 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CD27P26842 AC006504.4-201ENST00000592118 1568 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms