Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rb1P13405 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rb1P13405 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.31■□□□□ 0.04
Rb1P13405 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.31■□□□□ 0.04
Rb1P13405 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Rb1P13405 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Rb1P13405 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rb1P13405 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Gm44492-201ENSMUST00000197012 141 ntBASIC15.31■□□□□ 0.04
Rb1P13405 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.31■□□□□ 0.04
Rb1P13405 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rb1P13405 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rb1P13405 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.31■□□□□ 0.04
Rb1P13405 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rb1P13405 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Rb1P13405 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rb1P13405 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rb1P13405 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.3■□□□□ 0.04
Rb1P13405 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.3■□□□□ 0.04
Rb1P13405 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.3■□□□□ 0.04
Rb1P13405 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rb1P13405 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rb1P13405 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.3■□□□□ 0.04
Rb1P13405 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rb1P13405 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rb1P13405 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Rb1P13405 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rb1P13405 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rb1P13405 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.29■□□□□ 0.04
Rb1P13405 Gm27301-201ENSMUST00000184012 127 ntBASIC15.29■□□□□ 0.04
Rb1P13405 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.29■□□□□ 0.04
Rb1P13405 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.29■□□□□ 0.04
Rb1P13405 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.29■□□□□ 0.04
Rb1P13405 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.29■□□□□ 0.04
Rb1P13405 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.29■□□□□ 0.04
Rb1P13405 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rb1P13405 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms