Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UbbP0CG49 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UbbP0CG49 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UbbP0CG49 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UbbP0CG49 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UbbP0CG49 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
UbbP0CG49 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
UbbP0CG49 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
UbbP0CG49 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UbbP0CG49 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.02□□□□□ -0.32
UbbP0CG49 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UbbP0CG49 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UbbP0CG49 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UbbP0CG49 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UbbP0CG49 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.02□□□□□ -0.33
UbbP0CG49 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.02□□□□□ -0.33
UbbP0CG49 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
UbbP0CG49 AA414768-201ENSMUST00000121924 1257 ntBASIC13.02□□□□□ -0.33
UbbP0CG49 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
UbbP0CG49 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
UbbP0CG49 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
UbbP0CG49 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.02□□□□□ -0.33
UbbP0CG49 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
UbbP0CG49 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UbbP0CG49 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
UbbP0CG49 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UbbP0CG49 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UbbP0CG49 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
UbbP0CG49 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.02□□□□□ -0.33
UbbP0CG49 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UbbP0CG49 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UbbP0CG49 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UbbP0CG49 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.01□□□□□ -0.33
UbbP0CG49 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UbbP0CG49 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Gm4459-201ENSMUST00000118750 468 ntBASIC13.01□□□□□ -0.33
UbbP0CG49 Gm23634-201ENSMUST00000175071 91 ntBASIC13.01□□□□□ -0.33
UbbP0CG49 Gm27742-201ENSMUST00000184667 60 ntBASIC13.01□□□□□ -0.33
UbbP0CG49 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.01□□□□□ -0.33
UbbP0CG49 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.01□□□□□ -0.33
UbbP0CG49 Gm8655-201ENSMUST00000221159 852 ntBASIC13.01□□□□□ -0.33
UbbP0CG49 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UbbP0CG49 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.01□□□□□ -0.33
UbbP0CG49 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
UbbP0CG49 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UbbP0CG49 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Gm14780-201ENSMUST00000118387 2737 ntBASIC13□□□□□ -0.33
UbbP0CG49 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Celf4-206ENSMUST00000224553 1729 ntBASIC13□□□□□ -0.33
UbbP0CG49 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13□□□□□ -0.33
UbbP0CG49 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Gm6728-201ENSMUST00000178117 1065 ntBASIC13□□□□□ -0.33
UbbP0CG49 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Gm8318-201ENSMUST00000182954 872 ntBASIC13□□□□□ -0.33
UbbP0CG49 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms