Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 CR392000.1-201ENST00000624770 1228 ntBASIC15.05■□□□□ -0
CD74P04233 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.05■□□□□ -0
CD74P04233 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.05■□□□□ -0
CD74P04233 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.05■□□□□ -0
CD74P04233 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
CD74P04233 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.05■□□□□ -0
CD74P04233 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 AC060834.1-201ENST00000443027 2032 ntBASIC15.05■□□□□ -0
CD74P04233 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.05■□□□□ -0
CD74P04233 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CD74P04233 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 PCDH8P1-201ENST00000428983 2773 ntBASIC15.04■□□□□ -0
CD74P04233 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.04■□□□□ -0
CD74P04233 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CD74P04233 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.04■□□□□ -0
CD74P04233 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.04■□□□□ -0
CD74P04233 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.04■□□□□ -0
CD74P04233 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 AC016396.2-201ENST00000562575 1417 ntBASIC15.04■□□□□ -0
CD74P04233 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.04■□□□□ -0
CD74P04233 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CD74P04233 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CD74P04233 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.04■□□□□ -0
CD74P04233 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.04■□□□□ -0
CD74P04233 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD74P04233 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.04■□□□□ -0
CD74P04233 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.04■□□□□ -0
CD74P04233 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.04■□□□□ -0
CD74P04233 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.04■□□□□ -0
CD74P04233 MIR4674-201ENST00000582457 87 ntBASIC15.04■□□□□ -0
CD74P04233 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.04■□□□□ -0
CD74P04233 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.04■□□□□ -0
CD74P04233 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD74P04233 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD74P04233 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CD74P04233 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD74P04233 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
CD74P04233 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CD74P04233 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.03■□□□□ -0
CD74P04233 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.03■□□□□ -0
CD74P04233 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.03■□□□□ -0
CD74P04233 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.03■□□□□ -0
CD74P04233 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CD74P04233 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.03■□□□□ -0
CD74P04233 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.03■□□□□ -0
CD74P04233 CA15P1-201ENST00000481698 905 ntBASIC15.03■□□□□ -0
CD74P04233 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.03■□□□□ -0
CD74P04233 RARRES2P10-201ENST00000564312 460 ntBASIC15.03■□□□□ -0
CD74P04233 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.03■□□□□ -0
CD74P04233 AC116407.2-201ENST00000613639 860 ntBASIC15.03■□□□□ -0
CD74P04233 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CD74P04233 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
CD74P04233 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CD74P04233 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD74P04233 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.03■□□□□ -0
CD74P04233 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.03■□□□□ -0
CD74P04233 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms