Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DHFRP00374 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DHFRP00374 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 GMCL1P1-201ENST00000463439 1581 ntBASIC15.52■□□□□ 0.07
DHFRP00374 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
DHFRP00374 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.52■□□□□ 0.07
DHFRP00374 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.52■□□□□ 0.07
DHFRP00374 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.52■□□□□ 0.07
DHFRP00374 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
DHFRP00374 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
DHFRP00374 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.52■□□□□ 0.07
DHFRP00374 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
DHFRP00374 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 AGGF1P2-201ENST00000426656 2106 ntBASIC15.51■□□□□ 0.07
DHFRP00374 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.51■□□□□ 0.07
DHFRP00374 GUSBP6-202ENST00000438529 1198 ntBASIC15.51■□□□□ 0.07
DHFRP00374 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.51■□□□□ 0.07
DHFRP00374 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 AC060766.5-201ENST00000590539 871 ntBASIC15.51■□□□□ 0.07
DHFRP00374 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.51■□□□□ 0.07
DHFRP00374 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
DHFRP00374 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.51■□□□□ 0.07
DHFRP00374 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DHFRP00374 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DHFRP00374 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
DHFRP00374 AC103702.1-201ENST00000548801 2630 ntBASIC15.5■□□□□ 0.07
DHFRP00374 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
DHFRP00374 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
DHFRP00374 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.5■□□□□ 0.07
DHFRP00374 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.5■□□□□ 0.07
DHFRP00374 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
DHFRP00374 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.5■□□□□ 0.07
DHFRP00374 AL121906.2-201ENST00000621597 723 ntBASIC15.5■□□□□ 0.07
DHFRP00374 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 AL355312.1-201ENST00000407115 2176 ntBASIC15.5■□□□□ 0.07
DHFRP00374 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.5■□□□□ 0.07
DHFRP00374 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
DHFRP00374 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
DHFRP00374 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
DHFRP00374 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DHFRP00374 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms