Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE3O75131 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.17■□□□□ 0.34
CPNE3O75131 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.17■□□□□ 0.34
CPNE3O75131 AL160237.2-201ENST00000556165 472 ntBASIC17.17■□□□□ 0.34
CPNE3O75131 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.17■□□□□ 0.34
CPNE3O75131 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.17■□□□□ 0.34
CPNE3O75131 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 AL390961.4-201ENST00000623958 2535 ntBASIC17.17■□□□□ 0.34
CPNE3O75131 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CPNE3O75131 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.17■□□□□ 0.34
CPNE3O75131 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE3O75131 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE3O75131 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 ANO7L1-203ENST00000602586 1720 ntBASIC17.16■□□□□ 0.34
CPNE3O75131 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE3O75131 AC079781.3-201ENST00000449110 356 ntBASIC17.16■□□□□ 0.34
CPNE3O75131 SAPCD2P3-201ENST00000455031 850 ntBASIC17.16■□□□□ 0.34
CPNE3O75131 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE3O75131 AC096582.2-201ENST00000510860 516 ntBASIC17.16■□□□□ 0.34
CPNE3O75131 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE3O75131 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 AC009154.2-201ENST00000621177 724 ntBASIC17.16■□□□□ 0.34
CPNE3O75131 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPNE3O75131 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPNE3O75131 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE3O75131 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE3O75131 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPNE3O75131 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE3O75131 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CPNE3O75131 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CPNE3O75131 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE3O75131 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE3O75131 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.15■□□□□ 0.34
CPNE3O75131 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE3O75131 BNIP3P18-201ENST00000593976 575 ntBASIC17.15■□□□□ 0.34
CPNE3O75131 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CPNE3O75131 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 AC104692.2-201ENST00000603054 253 ntBASIC17.15■□□□□ 0.34
CPNE3O75131 AL121912.1-201ENST00000603683 238 ntBASIC17.15■□□□□ 0.34
CPNE3O75131 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.15■□□□□ 0.34
CPNE3O75131 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE3O75131 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms