Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX4O60224 AP001094.4-201ENST00000579008 2176 ntBASIC16.26■□□□□ 0.19
SSX4O60224 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.26■□□□□ 0.19
SSX4O60224 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 UPK3BP1-201ENST00000428678 509 ntBASIC16.26■□□□□ 0.19
SSX4O60224 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
SSX4O60224 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 SLC25A6P5-201ENST00000435663 894 ntBASIC16.26■□□□□ 0.19
SSX4O60224 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX4O60224 AL512604.3-201ENST00000569583 964 ntBASIC16.26■□□□□ 0.19
SSX4O60224 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SSX4O60224 AC141257.4-201ENST00000634557 245 ntBASIC16.26■□□□□ 0.19
SSX4O60224 AC136944.6-201ENST00000634818 245 ntBASIC16.26■□□□□ 0.19
SSX4O60224 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SSX4O60224 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX4O60224 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSX4O60224 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SSX4O60224 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SSX4O60224 PCDHB19P-201ENST00000570871 2371 ntBASIC16.25■□□□□ 0.19
SSX4O60224 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.25■□□□□ 0.19
SSX4O60224 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.25■□□□□ 0.19
SSX4O60224 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.25■□□□□ 0.19
SSX4O60224 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.25■□□□□ 0.19
SSX4O60224 AL353719.1-201ENST00000566847 864 ntBASIC16.25■□□□□ 0.19
SSX4O60224 AC091076.1-201ENST00000610741 619 ntBASIC16.25■□□□□ 0.19
SSX4O60224 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SSX4O60224 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SSX4O60224 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.25■□□□□ 0.19
SSX4O60224 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.25■□□□□ 0.19
SSX4O60224 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SSX4O60224 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX4O60224 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SSX4O60224 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.25■□□□□ 0.19
SSX4O60224 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SSX4O60224 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.24■□□□□ 0.19
SSX4O60224 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.24■□□□□ 0.19
SSX4O60224 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.24■□□□□ 0.19
SSX4O60224 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.24■□□□□ 0.19
SSX4O60224 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 FAM8A6P-201ENST00000407496 1135 ntBASIC16.24■□□□□ 0.19
SSX4O60224 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.24■□□□□ 0.19
SSX4O60224 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.24■□□□□ 0.19
SSX4O60224 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 AC140113.3-201ENST00000605663 199 ntBASIC16.24■□□□□ 0.19
SSX4O60224 AL023803.3-201ENST00000615559 522 ntBASIC16.24■□□□□ 0.19
SSX4O60224 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSX4O60224 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.24■□□□□ 0.19
SSX4O60224 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 AL499627.1-201ENST00000569373 2188 ntBASIC16.24■□□□□ 0.19
SSX4O60224 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SSX4O60224 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms