Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 KRT17P7-201ENST00000451704 1104 ntBASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TMEM88BA6NKF7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 FAM185BP-201ENST00000443595 716 ntBASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 AC079140.1-201ENST00000508039 487 ntBASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 AC084346.2-201ENST00000607097 949 ntBASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 AL158211.3-201ENST00000607385 239 ntBASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM88BA6NKF7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 GPS2P2-201ENST00000430745 888 ntBASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 AL513480.1-201ENST00000451731 511 ntBASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 SERBP1P5-201ENST00000510079 1181 ntBASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TMEM88BA6NKF7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms