Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 AC026366.1-201ENST00000488803 879 ntBASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 MIR3180-5-201ENST00000583743 153 ntBASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV18A0A075B6X5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 AC133681.1-201ENST00000465482 601 ntBASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 MIR6786-201ENST00000616843 113 ntBASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV18A0A075B6X5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 AC100803.2-201ENST00000562459 1963 ntBASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 AC142086.2-201ENST00000569753 217 ntBASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TRAV18A0A075B6X5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms