Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 AC008741.2-201ENST00000612792 3115 ntBASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 LINC01023-201ENST00000606054 436 ntBASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 AC083906.6-201ENST00000641366 219 ntBASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 AC116562.4-202ENST00000641738 218 ntBASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 AC138028.4-201ENST00000564984 1845 ntBASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HCC1Q9Y3T6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
R3HCC1Q9Y3T6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
R3HCC1Q9Y3T6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
R3HCC1Q9Y3T6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 LINC01568-207ENST00000641790 1380 ntBASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 SLC25A1P2-201ENST00000430693 912 ntBASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 PCDHB19P-201ENST00000570871 2371 ntBASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HCC1Q9Y3T6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
R3HCC1Q9Y3T6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms