Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 ABHD17AP1-201ENST00000358206 933 ntBASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 RPS2P55-201ENST00000397318 883 ntBASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC107956.1-201ENST00000494359 873 ntBASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC113410.3-201ENST00000623366 203 ntBASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC112497.1-201ENST00000624824 639 ntBASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NIPSNAP3AQ9UFN0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 AP005242.2-201ENST00000580065 1175 ntBASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPSNAP3AQ9UFN0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 TSPY17P-201ENST00000450329 467 ntBASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 AC104390.1-201ENST00000555663 520 ntBASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 WWOX-216ENST00000569818 525 ntBASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 ITM2C-210ENST00000620962 501 ntBASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPSNAP3AQ9UFN0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms