Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gpc6Q9R087 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.02□□□□□ -0.16
Gpc6Q9R087 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gpc6Q9R087 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gpc6Q9R087 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Gm13836-201ENSMUST00000121159 501 ntBASIC14.01□□□□□ -0.17
Gpc6Q9R087 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 CT009738.1-201ENSMUST00000219031 809 ntBASIC14.01□□□□□ -0.17
Gpc6Q9R087 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.01□□□□□ -0.17
Gpc6Q9R087 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gpc6Q9R087 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gpc6Q9R087 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Gpc6Q9R087 Efs-202ENSMUST00000227037 2540 ntBASIC14□□□□□ -0.17
Gpc6Q9R087 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gpc6Q9R087 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gpc6Q9R087 Mir3081-201ENSMUST00000175305 84 ntBASIC14□□□□□ -0.17
Gpc6Q9R087 Gm44454-201ENSMUST00000198541 138 ntBASIC14□□□□□ -0.17
Gpc6Q9R087 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14□□□□□ -0.17
Gpc6Q9R087 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 AC127349.1-201ENSMUST00000224590 266 ntBASIC14□□□□□ -0.17
Gpc6Q9R087 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14□□□□□ -0.17
Gpc6Q9R087 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gpc6Q9R087 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms