Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 AC112187.3-201ENST00000607844 408 ntBASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 AC020658.4-201ENST00000613987 684 ntBASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 GAPDHP74-202ENST00000632456 782 ntBASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 AL163051.1-201ENST00000569214 1512 ntBASIC21.55■■□□□ 1.04
FOXD4L1Q9NU39 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 VN1R53P-201ENST00000429536 957 ntBASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXD4L1Q9NU39 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 FSCN1P1-201ENST00000568912 1481 ntBASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 SRPK2P-201ENST00000523408 1100 ntBASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 FGA-203ENST00000622532 1130 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 SIRPAP1-201ENST00000448467 1770 ntBASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXD4L1Q9NU39 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 AC009102.3-201ENST00000623118 1491 ntBASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 AD000864.1-201ENST00000624076 2295 ntBASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXD4L1Q9NU39 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms