Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 ASAH1-233ENST00000636701 2158 ntTSL 524.93■■□□□ 1.581e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-264ENST00000637898 664 ntTSL 224.68■■□□□ 1.541e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC24.47■■□□□ 1.511e-12■■□□□ 11.4
DROSHAQ9NRR4 CBX4-204ENST00000495122 490 ntTSL 324.37■■□□□ 1.491e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.451e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC24.05■■□□□ 1.441e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-243ENST00000637095 2048 ntTSL 523.56■■□□□ 1.361e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC23.48■■□□□ 1.351e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC22.8■■□□□ 1.241e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-222ENST00000636160 2328 ntTSL 522.57■■□□□ 1.21e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC22.55■■□□□ 1.21e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.181e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-228ENST00000636494 1975 ntTSL 522.33■■□□□ 1.161e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-241ENST00000637013 2649 ntTSL 521.92■■□□□ 1.11e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-207ENST00000519468 746 ntTSL 321.75■■□□□ 1.071e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-247ENST00000637429 2558 ntTSL 520.83■□□□□ 0.931e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-245ENST00000637244 3151 ntTSL 1 (best)20.42■□□□□ 0.861e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.691e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC17.34■□□□□ 0.371e-12■■□□□ 11.4
DROSHAQ9NRR4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.341e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-269ENST00000638069 3068 ntTSL 516.26■□□□□ 0.191e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-225ENST00000636299 543 ntTSL 414.23□□□□□ -0.131e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-259ENST00000637792 581 ntTSL 414.23□□□□□ -0.131e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-226ENST00000636435 4611 ntTSL 214.03□□□□□ -0.161e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC13.85□□□□□ -0.191e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-248ENST00000637484 2304 ntTSL 512.33□□□□□ -0.441e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-220ENST00000636050 2546 ntTSL 511.43□□□□□ -0.581e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC10.88□□□□□ -0.671e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-260ENST00000637805 780 ntTSL 510.47□□□□□ -0.731e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-253ENST00000637609 4981 ntTSL 510.44□□□□□ -0.741e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC10.39□□□□□ -0.751e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC10.17□□□□□ -0.781e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-238ENST00000636828 3365 ntTSL 27.85□□□□□ -1.151e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-234ENST00000636715 1025 ntTSL 55.31□□□□□ -1.561e-12■■□□□ 11.4
DROSHAQ9NRR4 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC16.17■□□□□ 0.181e-7■■□□□ 11.4
DROSHAQ9NRR4 SLC38A2-203ENST00000547252 847 ntTSL 313.21□□□□□ -0.294e-11■■□□□ 11.4
DROSHAQ9NRR4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.43□□□□□ -1.384e-11■■□□□ 11.4
DROSHAQ9NRR4 FASN-213ENST00000637693 100 ntTSL 514.49□□□□□ -0.099e-12■□□□□ 11.3
DROSHAQ9NRR4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.741e-6■□□□□ 11.3
DROSHAQ9NRR4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.011e-6■□□□□ 11.3
DROSHAQ9NRR4 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.131e-6■□□□□ 11.3
DROSHAQ9NRR4 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC13.62□□□□□ -0.231e-6■□□□□ 11.3
DROSHAQ9NRR4 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC11.79□□□□□ -0.521e-6■□□□□ 11.3
DROSHAQ9NRR4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC30.32■■■□□ 2.444e-7■□□□□ 11.3
DROSHAQ9NRR4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC37.98■■■■□ 3.676e-8■□□□□ 11.3
DROSHAQ9NRR4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC37.1■■■■□ 3.536e-8■□□□□ 11.3
DROSHAQ9NRR4 AMDHD2-205ENST00000563145 859 ntTSL 230.54■■■□□ 2.483e-8■□□□□ 11.3
DROSHAQ9NRR4 TBX2-AS1-204ENST00000591313 640 ntTSL 229.14■■■□□ 2.266e-8■□□□□ 11.3
DROSHAQ9NRR4 TBX2-AS1-205ENST00000592009 330 ntTSL 326.09■■□□□ 1.776e-8■□□□□ 11.3
DROSHAQ9NRR4 AMDHD2-206ENST00000563444 529 ntTSL 222.93■■□□□ 1.263e-8■□□□□ 11.3
DROSHAQ9NRR4 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC18.46■□□□□ 0.556e-8■□□□□ 11.3
DROSHAQ9NRR4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.215e-8■□□□□ 11.3
DROSHAQ9NRR4 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.465e-8■□□□□ 11.3
DROSHAQ9NRR4 SLC17A9-207ENST00000488738 3992 ntTSL 217.27■□□□□ 0.355e-8■□□□□ 11.3
DROSHAQ9NRR4 DYRK1A-209ENST00000608928 483 ntTSL 533.83■■■■□ 3.018e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC38.25■■■■□ 3.712e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-210ENST00000612854 801 ntTSL 5 BASIC38.25■■■■□ 3.712e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-214ENST00000622402 642 ntTSL 5 BASIC38.25■■■■□ 3.712e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC34.82■■■■□ 3.172e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC28.88■■■□□ 2.212e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.22e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-204ENST00000593636 1012 ntTSL 228.05■■■□□ 2.082e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC26.33■■□□□ 1.812e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-207ENST00000595185 760 ntTSL 1 (best)24.13■■□□□ 1.452e-7■□□□□ 11.3
DROSHAQ9NRR4 MED25-209ENST00000612791 881 ntTSL 5 BASIC18.71■□□□□ 0.592e-7■□□□□ 11.3
DROSHAQ9NRR4 PIGZ-201ENST00000238138 868 ntTSL 240.75■■■■■ 4.118e-7■□□□□ 11.3
DROSHAQ9NRR4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.778e-7■□□□□ 11.3
DROSHAQ9NRR4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC24.92■■□□□ 1.588e-7■□□□□ 11.3
DROSHAQ9NRR4 EIF5A-209ENST00000573714 602 ntTSL 332.03■■■□□ 2.724e-7■□□□□ 11.3
DROSHAQ9NRR4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.694e-7■□□□□ 11.3
DROSHAQ9NRR4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.224e-7■□□□□ 11.3
DROSHAQ9NRR4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.64e-7■□□□□ 11.3
DROSHAQ9NRR4 MBD6-214ENST00000552659 530 ntTSL 320.87■□□□□ 0.933e-6■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-215ENST00000474353 2906 ntTSL 214.79□□□□□ -0.047e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.137e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.537e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.567e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.587e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.587e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.637e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.787e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.917e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.947e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -17e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.17e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.147e-8■□□□□ 11.3
DROSHAQ9NRR4 SORBS1-217ENST00000486141 575 ntTSL 33.4□□□□□ -1.867e-8■□□□□ 11.3
DROSHAQ9NRR4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.76e-7■□□□□ 11.3
DROSHAQ9NRR4 ARHGAP4-224ENST00000494813 1939 ntTSL 531.76■■■□□ 2.676e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-211ENST00000477750 1062 ntTSL 231.07■■■□□ 2.566e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-206ENST00000432089 599 ntTSL 330.08■■■□□ 2.416e-7■□□□□ 11.3
DROSHAQ9NRR4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC29.13■■■□□ 2.256e-7■□□□□ 11.3
DROSHAQ9NRR4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.247e-19■□□□□ 11.3
DROSHAQ9NRR4 NAA10-210ENST00000467451 743 ntTSL 228.77■■■□□ 2.26e-7■□□□□ 11.3
DROSHAQ9NRR4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.16e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-207ENST00000460996 908 ntTSL 227.46■■□□□ 1.996e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-209ENST00000466877 1080 ntTSL 1 (best)27.22■■□□□ 1.956e-7■□□□□ 11.3
DROSHAQ9NRR4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC27.12■■□□□ 1.936e-7■□□□□ 11.3
DROSHAQ9NRR4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.786e-7■□□□□ 11.3
DROSHAQ9NRR4 NAA10-202ENST00000370011 538 ntTSL 524.59■■□□□ 1.536e-7■□□□□ 11.3
Retrieved 100 of 16,331 protein–RNA pairs in 78 ms