Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC4Q9NPP4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC4Q9NPP4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLRC4Q9NPP4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 AC145285.6-201ENST00000604632 637 ntBASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.43■□□□□ 0.7
NLRC4Q9NPP4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NLRC4Q9NPP4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 AC010203.1-204ENST00000548782 407 ntBASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 AC008687.5-201ENST00000593746 558 ntBASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 AC080080.1-201ENST00000625121 2420 ntBASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLRC4Q9NPP4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC4Q9NPP4 AC079602.3-201ENST00000623931 403 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms