Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3Q9BZ76 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AC003669.1-201ENST00000334569 611 ntBASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 BID-203ENST00000399765 1879 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 RN7SL692P-201ENST00000464677 288 ntBASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AL132655.2-201ENST00000596276 594 ntBASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 AC116407.2-201ENST00000613639 860 ntBASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3Q9BZ76 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 KRT17P7-201ENST00000451704 1104 ntBASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 GPR53P-205ENST00000457298 1084 ntBASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3Q9BZ76 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 AC092720.2-201ENST00000602388 1665 ntBASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 AC125634.1-201ENST00000438758 1403 ntBASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 RCC2P3-201ENST00000418112 1537 ntBASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 MIR943-201ENST00000401286 94 ntBASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms