Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 RFPL4AP1-201ENST00000530883 850 ntBASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 AL805961.1-202ENST00000641562 540 ntBASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 AC073592.3-201ENST00000625118 1834 ntBASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CRAMP1Q96RY5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CRAMP1Q96RY5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CRAMP1Q96RY5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 IGLL3P-201ENST00000412472 434 ntBASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CRAMP1Q96RY5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 ELL2P1-201ENST00000413990 1906 ntBASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 AC018445.3-201ENST00000624177 1945 ntBASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 AC010654.1-201ENST00000615722 808 ntBASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 GPR89P-201ENST00000407924 1495 ntBASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CRAMP1Q96RY5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 CNN2P11-201ENST00000429351 262 ntBASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 CYMP-203ENST00000474680 1263 ntBASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.74■■□□□ 1.07
CRAMP1Q96RY5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CRAMP1Q96RY5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms