Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 RPS2P1-201ENST00000434010 821 ntBASIC20.91■□□□□ 0.94
TRIM47Q96LD4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 AL591424.1-201ENST00000442569 1213 ntBASIC20.91■□□□□ 0.94
TRIM47Q96LD4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 AC090164.3-201ENST00000610780 2143 ntBASIC20.91■□□□□ 0.94
TRIM47Q96LD4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 AC079781.4-201ENST00000641908 219 ntBASIC20.91■□□□□ 0.94
TRIM47Q96LD4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM47Q96LD4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 AC112777.1-201ENST00000540175 1423 ntBASIC20.9■□□□□ 0.94
TRIM47Q96LD4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 YBX2P1-201ENST00000394192 760 ntBASIC20.9■□□□□ 0.94
TRIM47Q96LD4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 SART3-203ENST00000546611 1184 ntBASIC20.9■□□□□ 0.94
TRIM47Q96LD4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 AC012640.2-201ENST00000561606 901 ntBASIC20.9■□□□□ 0.94
TRIM47Q96LD4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.9■□□□□ 0.94
TRIM47Q96LD4 AC068587.9-201ENST00000641814 219 ntBASIC20.9■□□□□ 0.94
TRIM47Q96LD4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM47Q96LD4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.89■□□□□ 0.94
TRIM47Q96LD4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM47Q96LD4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM47Q96LD4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TRIM47Q96LD4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM47Q96LD4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM47Q96LD4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 AC092910.1-201ENST00000482027 1129 ntBASIC20.89■□□□□ 0.93
TRIM47Q96LD4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TRIM47Q96LD4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms