Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 DUTP2-201ENST00000519164 463 ntBASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 NEK4P2-201ENST00000580004 1012 ntBASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 AL138966.2-201ENST00000621997 464 ntBASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CCHCR1Q8TD31 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 LINC01126-201ENST00000623515 1646 ntBASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AC009947.2-201ENST00000444014 672 ntBASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AC104390.1-201ENST00000555663 520 ntBASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AL031432.5-201ENST00000641059 760 ntBASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.67■□□□□ 0.58
CCHCR1Q8TD31 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AC073508.3-201ENST00000619697 1419 ntBASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 KRT18P57-201ENST00000443599 1254 ntBASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AC140113.3-201ENST00000605663 199 ntBASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCHCR1Q8TD31 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms