Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pif1Q80SX8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pif1Q80SX8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pif1Q80SX8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pif1Q80SX8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pif1Q80SX8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Gm5186-201ENSMUST00000218781 920 ntBASIC13.83□□□□□ -0.2
Pif1Q80SX8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.83□□□□□ -0.2
Pif1Q80SX8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pif1Q80SX8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gm25287-201ENSMUST00000103846 110 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gm22918-201ENSMUST00000103855 110 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gm27622-201ENSMUST00000183779 60 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gm5779-201ENSMUST00000218467 910 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.82□□□□□ -0.2
Pif1Q80SX8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pif1Q80SX8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pif1Q80SX8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms